Cutting-edge Molecular Diagnostics for Early Disease Detection
Notable Achievements
Giner, Inc. consistently engages in a wide range of projects, including the development of aptamers and nucleic acid-based electrochemical and other biosensors. Among our notable achievements is the aptamer-based multiplexed detection of opioid metabolites in wastewater samples, boasting a detection limit of 27 pg/mL. This groundbreaking work was co-published in ACS Nano (2022) and highlighted in Science Daily, Boston College. Additionally, our team at Giner has made significant progress in detecting multiple gene biomarkers (CYP2D6 and CYP2C19 and their allele variants) associated with drug metabolism and in non-invasively detecting oxytocin peptide at 1 pg/mL in saliva (published in International Journal of Molecular Sciences, 2023), blood, and hair extract samples. Our research also extends to the development of fungal gene sensors, achieving an impressive limit of detection equivalent to 10 copies/mL for Histoplasma genes, including CBP1, M-antigen, and HCP100, as published in Biosensors and Bioelectronics in 2023.
Furthermore, we have advanced the non-invasive detection of cancer gene mutations and personalized therapy for non-small cell lung cancer (NSCLC). Giner’s PCR-enhanced ligation assay delivers genomic DNA sensitivity down to 2 copies/µL, corresponding to mutation allele frequency (MAF) levels of 0.01%. This fulfills the clinical sensitivity requirement and surpasses the sensitivity of the current standard digital droplet PCR (ddPCR) by 10-fold, which has a limit of 0.1% for MAF. Ongoing work aims to adapt the assay for multiplexed ctDNA detection, validate with patient plasma samples, and integrate into a prototype, thus achieving a significant milestone toward regulatory evaluation. Fully developed, this technology will facilitate the enactment of personalized therapy, improve treatment outcomes, and offer significant advantages over existing methods such as lower test cost, easier sample preparation, and faster sample-to-result turnaround.
Publications
- M. Rana, N. Yildirim, N. Ward, S. Vega, M. Heffernan, A.A. Argun, “Highly Specific Detection of Oxytocin in Saliva” Int. J. Mol. Sci. 2023, 24(5), 4832.
- M. Rana, T. Yilmaz, S. Cohen, S. Beyhan, A.A. Argun, “A novel biosensor for ultrasensitive detection of fungal genes” Biosensors and Bioelectronics (2023), 222, 114986.
- A.A. Argun, M. Rana, “Point-of-care (POC) Assay to Detect Dengue Exposure” Biosensors and Nanotheranostics 2022, 1 (1), 001-006.
- N. Kumar*, M. Rana*, M. Geiwitz, N. I. Khan, M. Catalano, J. C. Ortiz-Marquez, H. Kitadai, A Weber, B. Dweik, X. Ling, T.V. Opijen, A.A. Argun, K. S. Burch. “Rapid, multianalyte detection of opioid metabolites in wastewater” (*co-first authors), ACS Nano (2022), 16 (3), 3704-3714 (highlighted in Science Daily, Boston College, and more)
- N. Kumar, M. Gray, J. C. Ortiz-Marquez, A Weber, C.R. Desmond, A. Argun, T.V. Opijen, K. S. Burch. “Detection of a multi-disease biomarker in saliva with graphene field transistors”. Med. Devices Sens. 2020; 3: e10121.
Patent Applications
- AA Argun, M Rana, “Detection of Oxytocin in a Biological Sample” U.S. Patent App. 63/448,878 (Feb 28, 2024)
- AA Argun, M Rana, “Method and system for detecting fungal genes and kit for use with same” US Patent App. 18/295,613 (Nov 23, 2023)
- AA Argun, M Rana, BM Dweik, NI Khan, A Weber, “Method and system for detecting one or more drugs and/or drug metabolites in wastewater” US Patent App. 17/887,347 (Feb 16, 2023)
Conference Abstracts
- M. Rana, S.M. Asil, C. Boutin, M.J. Kachwala, J. Espejo, A.A. Argun (PI) “Detection of EGFR mutations T790M and L858R for therapeutic guidance of NSCLC” 2024 World Conference on Lung Cancer (Control/Tracking # 2024-RA-2397-WCLC), September 7-10, 2024, San Diego, CA, USA.
- Shima M Asil, PhD, Chia-Yi (Jobert) Hsiao, MS, Pengfei Xie, PhD, Avni A Argun, PhD, Muhit Rana, PhD (PI) “Rapid and Reprogrammable Assay for Multiplexed Gene Detection” 2024 MHSRS (Abstract ID: MHSRS-24-13209), August 2024, Kissimmee, FL, USA.
- A Argun, M Rana, A Weber, M Manoukian, A Koh, E Toprak “Electrochemical Sensors to Monitor Multi-Drug Resistant Organisms in the Gut Microbiome” 2019, Electrochemical Society Meeting Abstracts 235, 2094-2094, May 26-30, 2019, Dallas, TX, USA.
- M Rana, A Weber, M Manoukian, B Dweik, A Argun “Highly Specific Detection of Oxytocin in Saliva” 2019, Electrochemical Society Meeting Abstracts 235, 1852-1852, May 26-30, 2019, Dallas, TX, USA.
- A Argun, A Weber, M Manoukian, M Rana, R Pierce, V Lovko, M Henry “Rapid and Low-Cost Field Detection of Marine Toxins” 2019, Electrochemical Society Meeting Abstracts 235, 2000-2000, May 26-30, 2019, Dallas, TX, USA.
- N. Kumar, A Weber, M. Gray, J. C. Ortiz-Marquez, C.R. Desmond, A. Argun, T.V. Opijen, K. S. Burch. “Reproducible fabrication of graphene field effect transistors for detection of CA1”. APS March Meeting 2019, Abstract: E12.00012; Volume 64, Number 2; March 4–8, 2019; Boston, MA, USA.